STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_06967Ankyrin repeat protein L63-like. (642 aa)    
Predicted Functional Partners:
THRCLA_20295
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.593
THRCLA_20529
RING-box protein 1.
    
 0.558
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
  0.555
THRCLA_03310
Uncharacterized protein.
    
  0.541
THRCLA_01311
Uncharacterized protein.
    
  0.539
THRCLA_11833
Fibronectin type-III domain-containing protein.
    
 0.538
THRCLA_22140
Uncharacterized protein.
    
 0.532
THRCLA_09817
Uncharacterized protein.
    
  0.529
THRCLA_05256
DUF667 domain-containing protein.
    
  0.529
THRCLA_11981
Glycerophosphodiesterase.
    
 0.492
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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