STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_06748Carbohydrate-binding protein. (635 aa)    
Predicted Functional Partners:
THRCLA_02564
Uncharacterized protein.
   
 0.999
THRCLA_10355
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.976
THRCLA_09256
Nuclear pore protein.
   
 0.976
THRCLA_07157
Uncharacterized protein.
   
 0.976
THRCLA_04478
Uncharacterized protein.
   
 0.976
THRCLA_06161
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.974
THRCLA_07903
Nucleoporin; Belongs to the WD repeat SEC13 family.
   
 0.967
THRCLA_08268
Nuclear pore glycoprotein.
   
0.965
THRCLA_03049
Uncharacterized protein.
    
 0.950
THRCLA_01895
Nuclear pore complex protein.
  
 0.942
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.