STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_21888Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (308 aa)    
Predicted Functional Partners:
THRCLA_00432
ATG13 domain-containing protein.
   
 0.848
THRCLA_05231
Uncharacterized protein.
    
 0.836
THRCLA_05347
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.562
THRCLA_05204
Xanthine dehydrogenase.
    
 0.542
THRCLA_22718
Protein kinase domain-containing protein.
    
 
 0.540
THRCLA_05770
Kinase.
    
 
 0.540
THRCLA_04548
Kinase.
    
 
 0.540
THRCLA_10040
Aminotran_1_2 domain-containing protein.
     
 0.509
THRCLA_10022
Peptide synthetase.
     
 0.502
THRCLA_20206
4-carboxymuconolactone decarboxylase.
     
 0.502
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.