Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
THRCLA_00300 | THRCLA_03774 | A0A1W0ABK4 | A0A1W0A174 | Sporangia induced dynein heavy chain. | Glycoside hydrolase. | 0.747 |
THRCLA_00300 | THRCLA_04852 | A0A1W0ABK4 | A0A1V9ZXS5 | Sporangia induced dynein heavy chain. | Dynein. | 0.794 |
THRCLA_00300 | THRCLA_05644 | A0A1W0ABK4 | A0A1V9ZVC7 | Sporangia induced dynein heavy chain. | Outer Dynein Arm Light Chain 2. | 0.560 |
THRCLA_00300 | THRCLA_07904 | A0A1W0ABK4 | A0A1V9ZBM0 | Sporangia induced dynein heavy chain. | Uncharacterized protein. | 0.731 |
THRCLA_00300 | THRCLA_08457 | A0A1W0ABK4 | A0A1V9Z634 | Sporangia induced dynein heavy chain. | Robl_LC7 domain-containing protein. | 0.687 |
THRCLA_00300 | THRCLA_10145 | A0A1W0ABK4 | A0A1V9YSI6 | Sporangia induced dynein heavy chain. | Tctex1 domain-containing protein 2. | 0.634 |
THRCLA_00300 | THRCLA_20507 | A0A1W0ABK4 | A0A1W0A6E5 | Sporangia induced dynein heavy chain. | Dynein light chain roadblock. | 0.681 |
THRCLA_00300 | THRCLA_22240 | A0A1W0ABK4 | A0A1V9Z8Q0 | Sporangia induced dynein heavy chain. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.714 |
THRCLA_00300 | THRCLA_22571 | A0A1W0ABK4 | A0A1V9YWN4 | Sporangia induced dynein heavy chain. | Dynein heavy chain. | 0.825 |
THRCLA_03774 | THRCLA_00300 | A0A1W0A174 | A0A1W0ABK4 | Glycoside hydrolase. | Sporangia induced dynein heavy chain. | 0.747 |
THRCLA_03774 | THRCLA_04852 | A0A1W0A174 | A0A1V9ZXS5 | Glycoside hydrolase. | Dynein. | 0.834 |
THRCLA_03774 | THRCLA_07904 | A0A1W0A174 | A0A1V9ZBM0 | Glycoside hydrolase. | Uncharacterized protein. | 0.999 |
THRCLA_03774 | THRCLA_08457 | A0A1W0A174 | A0A1V9Z634 | Glycoside hydrolase. | Robl_LC7 domain-containing protein. | 0.605 |
THRCLA_03774 | THRCLA_09851 | A0A1W0A174 | A0A1V9YU58 | Glycoside hydrolase. | Dynein heavy chain. | 0.747 |
THRCLA_03774 | THRCLA_20507 | A0A1W0A174 | A0A1W0A6E5 | Glycoside hydrolase. | Dynein light chain roadblock. | 0.605 |
THRCLA_03774 | THRCLA_22240 | A0A1W0A174 | A0A1V9Z8Q0 | Glycoside hydrolase. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.957 |
THRCLA_03774 | THRCLA_22571 | A0A1W0A174 | A0A1V9YWN4 | Glycoside hydrolase. | Dynein heavy chain. | 0.747 |
THRCLA_04852 | THRCLA_00300 | A0A1V9ZXS5 | A0A1W0ABK4 | Dynein. | Sporangia induced dynein heavy chain. | 0.794 |
THRCLA_04852 | THRCLA_03774 | A0A1V9ZXS5 | A0A1W0A174 | Dynein. | Glycoside hydrolase. | 0.834 |
THRCLA_04852 | THRCLA_05644 | A0A1V9ZXS5 | A0A1V9ZVC7 | Dynein. | Outer Dynein Arm Light Chain 2. | 0.790 |
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