STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_04500Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. (639 aa)    
Predicted Functional Partners:
THRCLA_09430
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
  
 0.999
THRCLA_01936
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.999
THRCLA_00308
Uncharacterized protein.
    
 0.983
THRCLA_08025
Uncharacterized protein.
    
 0.975
THRCLA_01992
Signal recognition particle receptor subunit alpha.
   
 0.965
THRCLA_23424
Beta subunit of the SRP receptor.
    
 
 0.941
THRCLA_04270
60S ribosomal protein L5.
    
 
 0.917
THRCLA_01406
60S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
    
 
 0.917
THRCLA_21823
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.916
THRCLA_03674
60S ribosomal protein L23a.
    
 0.916
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.