STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_04377Uncharacterized protein. (867 aa)    
Predicted Functional Partners:
THRCLA_11238
Periodic tryptophan protein 2.
   
 0.999
THRCLA_08609
BP28CT domain-containing protein.
   
 0.999
THRCLA_05283
U3 small nucleolar RNA-associated protein.
   
 0.999
THRCLA_03969
WD_REPEATS_REGION domain-containing protein.
   
 0.999
THRCLA_03475
U3 small nucleolar RNA-associated protein.
   
 0.999
THRCLA_11160
WD_REPEATS_REGION domain-containing protein.
   
 0.998
THRCLA_08474
U3 small nucleolar RNA-associated protein 18.
   
 0.998
THRCLA_07506
Nucleolar protein 6.
   
 0.998
THRCLA_05180
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.998
THRCLA_04731
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 0.998
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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