STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_04018Epimerase domain-containing protein. (326 aa)    
Predicted Functional Partners:
THRCLA_07959
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.912
THRCLA_04927
40S ribosomal protein S10.
   
 0.912
THRCLA_04684
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.912
THRCLA_02405
40S ribosomal protein S3-3.
   
 0.912
THRCLA_09629
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.911
THRCLA_21391
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.911
THRCLA_20680
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.911
THRCLA_21226
Ribosomal_S10 domain-containing protein.
   
 0.908
THRCLA_20306
40S ribosomal protein S16.
   
 0.904
THRCLA_21999
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
  0.897
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.