STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_20993HTH psq-type domain-containing protein. (365 aa)    
Predicted Functional Partners:
THRCLA_08153
DNA-directed RNA polymerase II 36 kDa polypeptide A.
   
 0.788
THRCLA_11900
Uncharacterized protein.
   
 0.778
THRCLA_20887
DNA-directed RNA polymerase I, II, and III subunit RPABC2.
   
 0.776
THRCLA_20849
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.749
THRCLA_03665
Histone-binding protein RBBP4.
    
 0.740
THRCLA_05803
DNA-directed RNA polymerase I and III subunit RPAC1.
   
 0.738
THRCLA_22604
Histone H2A; Belongs to the histone H2A family.
    
 0.736
THRCLA_09145
RPOL4c domain-containing protein.
    
 0.736
THRCLA_05880
DEAD/DEAH box RNA helicase.
    
 0.733
THRCLA_23331
Uncharacterized protein.
    
  0.731
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.