STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_02971Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (150 aa)    
Predicted Functional Partners:
THRCLA_22031
Vesicle transporter GOT1B.
   
 
 0.619
THRCLA_09605
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.515
THRCLA_08772
Syntaxin; Belongs to the syntaxin family.
    
 
 0.515
THRCLA_07464
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.477
THRCLA_08784
Villin.
    
   0.448
THRCLA_01311
Uncharacterized protein.
    
   0.414
THRCLA_00451
Uncharacterized protein.
    
   0.414
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.