Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
THRCLA_00008 | THRCLA_01453 | A0A1W0ACN4 | A0A1W0A8H8 | LsmAD domain-containing protein. | Ras GTPase-activating protein-binding protein. | 0.695 |
THRCLA_00008 | THRCLA_01806 | A0A1W0ACN4 | A0A1W0A764 | LsmAD domain-containing protein. | DEAD/DEAH box RNA helicase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.903 |
THRCLA_00008 | THRCLA_08326 | A0A1W0ACN4 | A0A1V9Z7D9 | LsmAD domain-containing protein. | Guanine nucleotide-binding protein subunit beta-2. | 0.443 |
THRCLA_00008 | THRCLA_09839 | A0A1W0ACN4 | A0A1V9YTZ2 | LsmAD domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.443 |
THRCLA_01453 | THRCLA_00008 | A0A1W0A8H8 | A0A1W0ACN4 | Ras GTPase-activating protein-binding protein. | LsmAD domain-containing protein. | 0.695 |
THRCLA_01453 | THRCLA_01806 | A0A1W0A8H8 | A0A1W0A764 | Ras GTPase-activating protein-binding protein. | DEAD/DEAH box RNA helicase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.623 |
THRCLA_01453 | THRCLA_06948 | A0A1W0A8H8 | A0A1V9ZHI4 | Ras GTPase-activating protein-binding protein. | AAA domain-containing protein. | 0.795 |
THRCLA_01453 | THRCLA_07801 | A0A1W0A8H8 | A0A1V9ZC68 | Ras GTPase-activating protein-binding protein. | ANK_REP_REGION domain-containing protein. | 0.695 |
THRCLA_01453 | THRCLA_08235 | A0A1W0A8H8 | A0A1V9Z8A3 | Ras GTPase-activating protein-binding protein. | Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. | 0.623 |
THRCLA_01453 | THRCLA_08326 | A0A1W0A8H8 | A0A1V9Z7D9 | Ras GTPase-activating protein-binding protein. | Guanine nucleotide-binding protein subunit beta-2. | 0.657 |
THRCLA_01453 | THRCLA_08448 | A0A1W0A8H8 | A0A1V9Z5Y0 | Ras GTPase-activating protein-binding protein. | ATP-binding cassette sub-family E member 1. | 0.638 |
THRCLA_01453 | THRCLA_09839 | A0A1W0A8H8 | A0A1V9YTZ2 | Ras GTPase-activating protein-binding protein. | WD_REPEATS_REGION domain-containing protein. | 0.657 |
THRCLA_01453 | THRCLA_10036 | A0A1W0A8H8 | A0A1V9YTD6 | Ras GTPase-activating protein-binding protein. | PUM-HD domain-containing protein. | 0.660 |
THRCLA_01453 | THRCLA_21735 | A0A1W0A8H8 | A0A1V9ZQ57 | Ras GTPase-activating protein-binding protein. | Mago nashi. | 0.688 |
THRCLA_01806 | THRCLA_00008 | A0A1W0A764 | A0A1W0ACN4 | DEAD/DEAH box RNA helicase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | LsmAD domain-containing protein. | 0.903 |
THRCLA_01806 | THRCLA_01453 | A0A1W0A764 | A0A1W0A8H8 | DEAD/DEAH box RNA helicase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Ras GTPase-activating protein-binding protein. | 0.623 |
THRCLA_01806 | THRCLA_06948 | A0A1W0A764 | A0A1V9ZHI4 | DEAD/DEAH box RNA helicase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | AAA domain-containing protein. | 0.648 |
THRCLA_01806 | THRCLA_07801 | A0A1W0A764 | A0A1V9ZC68 | DEAD/DEAH box RNA helicase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | ANK_REP_REGION domain-containing protein. | 0.903 |
THRCLA_01806 | THRCLA_10036 | A0A1W0A764 | A0A1V9YTD6 | DEAD/DEAH box RNA helicase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | PUM-HD domain-containing protein. | 0.557 |
THRCLA_01806 | THRCLA_21735 | A0A1W0A764 | A0A1V9ZQ57 | DEAD/DEAH box RNA helicase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Mago nashi. | 0.768 |
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