STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_01453Ras GTPase-activating protein-binding protein. (454 aa)    
Predicted Functional Partners:
THRCLA_06948
AAA domain-containing protein.
    
 0.795
THRCLA_07801
ANK_REP_REGION domain-containing protein.
   
 
 0.695
THRCLA_00008
LsmAD domain-containing protein.
   
 
 0.695
THRCLA_21735
Mago nashi.
    
  0.688
THRCLA_10036
PUM-HD domain-containing protein.
   
 
 0.660
THRCLA_09839
WD_REPEATS_REGION domain-containing protein.
   
 
 0.657
THRCLA_08326
Guanine nucleotide-binding protein subunit beta-2.
   
 
 0.657
THRCLA_08448
ATP-binding cassette sub-family E member 1.
   
 
 0.638
THRCLA_08235
Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner.
    
 
 0.623
THRCLA_01806
DEAD/DEAH box RNA helicase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.623
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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