STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_01060Cathepsin B, cysteine protease family C01A; Belongs to the peptidase C1 family. (390 aa)    
Predicted Functional Partners:
THRCLA_11925
Pept_C1 domain-containing protein.
  
  0.624
THRCLA_21037
Cysteine protease family C01A; Belongs to the peptidase C1 family.
  
  0.623
THRCLA_04408
Cysteine protease family C01A; Belongs to the peptidase C1 family.
  
 
0.529
THRCLA_22939
Cysteine protease family C01A; Belongs to the peptidase C1 family.
  
 
0.527
THRCLA_07960
Cysteine protease family C01A; Belongs to the peptidase C1 family.
  
 
0.521
THRCLA_02833
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.511
THRCLA_09957
40S ribosomal protein S14.
   
 0.495
THRCLA_22504
Sushi domain-containing protein.
    
 0.484
THRCLA_09658
Syntaxin; Belongs to the syntaxin family.
    
   0.459
THRCLA_08986
DNA polymerase epsilon subunit.
    
   0.459
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.