STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_20131Ubiquitin-specific protease; Belongs to the peptidase C19 family. (389 aa)    
Predicted Functional Partners:
THRCLA_06556
Phosphatidylinositol kinase (PIK-E3).
   
 0.812
THRCLA_20294
Ubiquitin.
   
 0.812
THRCLA_07797
Ubiquitin.
    
 0.763
THRCLA_08343
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.763
THRCLA_22251
Ubiquitin-like domain-containing protein.
    
 0.763
THRCLA_05746
Non-selective Cation Channel-2 (NSCC2) Family.
    
 0.753
THRCLA_02189
UV excision repair protein RAD23.
    
 0.748
THRCLA_03908
Uncharacterized protein.
    
 0.715
THRCLA_01649
Uncharacterized protein.
    
 0.715
THRCLA_20241
Uncharacterized protein.
    
 
 0.647
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.