STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_00342FAD-dependent oxidoreductase domain-containing protein. (486 aa)    
Predicted Functional Partners:
THRCLA_01161
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.451
THRCLA_08703
Tyrosine--tRNA ligase.
   
  
 0.445
THRCLA_10344
Acyl-CoA dehydrogenase family member 9, mitochondrial.
   
 
 0.430
THRCLA_05458
Acyl-CoA dehydrogenase.
   
 
 0.430
THRCLA_00594
Uncharacterized protein.
   
  
 0.410
THRCLA_00626
3-ketoacyl-CoA thiolase, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
      
 0.403
THRCLA_02389
Uncharacterized protein.
      
 0.402
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.