STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_00228HECT E3 ubiquitin ligase. (531 aa)    
Predicted Functional Partners:
THRCLA_06556
Phosphatidylinositol kinase (PIK-E3).
   
 0.963
THRCLA_20294
Ubiquitin.
   
 0.963
THRCLA_23263
Ubiquitin-conjugating enzyme E2.
    
 0.955
THRCLA_09842
Ubiquitin-conjugating enzyme E2; Belongs to the carbohydrate kinase PfkB family.
    
 0.955
THRCLA_09039
Ubiquitin-conjugating enzyme E2 T-like; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.955
THRCLA_08500
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.955
THRCLA_05460
Uncharacterized protein.
    
 0.955
THRCLA_03374
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.955
THRCLA_11410
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 0.943
THRCLA_09396
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 0.943
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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