STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518505_02300Unannotated protein. (671 aa)    
Predicted Functional Partners:
GCA_000518505_03013
Unannotated protein.
   
 0.762
GCA_000518505_00860
Unannotated protein.
  
 
  0.641
GCA_000518505_02301
Unannotated protein.
       0.618
GCA_000518505_02302
Unannotated protein.
       0.618
GCA_000518505_02303
Unannotated protein.
       0.618
GCA_000518505_02304
Unannotated protein.
       0.573
GCA_000518505_02305
Unannotated protein.
       0.573
GCA_000518505_00960
Unannotated protein.
    
  0.545
GCA_000518505_01244
Unannotated protein.
    
  0.545
GCA_000518505_01645
Unannotated protein.
    
  0.545
Your Current Organism:
Olleya sp. VCSA23
NCBI taxonomy Id: 745717
Other names: O. sp. VCSA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.