STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFD24120.1Cyclase/dehydrase. (210 aa)    
Predicted Functional Partners:
fdh
Alcohol dehydrogenase GroES-like domain family.
 
    0.728
AFD24121.1
Hypothetical protein.
       0.704
AFD24718.1
dTDP-4-dehydrorhamnose reductase and Glycosyl hydrolase family 1.
  
     0.679
AFD25055.1
Hypothetical protein.
  
  
 0.566
AFD26389.1
Malto-oligosyltrehalose synthase.
  
    0.562
AFD24401.1
Hypothetical protein.
  
     0.516
AFD26424.1
Ribonuclease BN.
 
     0.502
AFD24628.1
Putative Glycoside hydrolase family 2; Belongs to the glycosyl hydrolase 2 family.
  
     0.489
topA
Type I topoisomerase, putative.
 
     0.466
AFD24436.1
Putative transmembrane protein.
  
     0.462
Your Current Organism:
Deinococcus gobiensis
NCBI taxonomy Id: 745776
Other names: D. gobiensis I-0, Deinococcus gobiensis I-0, Deinococcus gobiensis str. I-0, Deinococcus gobiensis strain I-0, Deinococcus sp. I-0
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.