STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chlIMagnesium protoporphyrin chelatase, putative. (464 aa)    
Predicted Functional Partners:
AFD24514.1
Magnesium chelatase, ChlI subunit.
  
 0.973
AFD26639.1
Von Willebrand factor, type A.
 
    0.826
cbiJ
Cobalt-factor III methyltransferase; Putative bifunctional: precorrin-3 methyltransferase and precorrin-6x reductase oxidoreductase protein.
     
 0.638
AFD23935.1
LmbE-like protein.
  
     0.615
AFD24257.1
Hypothetical protein.
       0.569
AFD25304.1
IG hypothetical 18565.
  
     0.513
AFD26324.1
Putative metal-dependent hydrolase.
  
     0.478
cobN
Cobaltochelatase, CobN subunit.
  
  
 0.435
AFD24518.1
Cobaltochelatase, CobN subunit.
  
  
 0.435
AFD24150.1
LmbE-like protein.
  
     0.428
Your Current Organism:
Deinococcus gobiensis
NCBI taxonomy Id: 745776
Other names: D. gobiensis I-0, Deinococcus gobiensis I-0, Deinococcus gobiensis str. I-0, Deinococcus gobiensis strain I-0, Deinococcus sp. I-0
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.