STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFD25938.1Hypothetical protein. (393 aa)    
Predicted Functional Partners:
AFD25939.1
Hypothetical protein.
 
     0.892
AFD25937.1
Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein.
       0.536
AFD25694.1
Phospholipase D-like domain protein.
  
     0.505
AFD24981.1
Hypothetical protein.
  
     0.492
AFD26042.1
Hypothetical protein.
  
     0.463
AFD26056.1
Hypothetical protein.
  
     0.451
AFD24321.1
GCN5-related N-acetyltransferase.
  
     0.447
AFD25777.1
Hypothetical protein.
 
     0.445
AFD24021.1
Hypothetical protein.
  
     0.444
AFD24230.1
Cytochrome C6, putative.
  
     0.439
Your Current Organism:
Deinococcus gobiensis
NCBI taxonomy Id: 745776
Other names: D. gobiensis I-0, Deinococcus gobiensis I-0, Deinococcus gobiensis str. I-0, Deinococcus gobiensis strain I-0, Deinococcus sp. I-0
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.