STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN17779.1HAMP domain-containing protein. (465 aa)    
Predicted Functional Partners:
SDN17751.1
Two-component system, OmpR family, response regulator ResD.
 0.981
SDO51494.1
HAMP domain-containing protein.
 
0.915
SDO57896.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.915
SDO29962.1
Two-component system, OmpR family, response regulator CssR.
 
 0.904
SDO51614.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.889
SDN96927.1
Two-component system, OmpR family, response regulator VicR.
 
 0.881
SDO51527.1
Response regulator receiver domain-containing protein.
  
 0.880
SDN55918.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 
 0.879
SDN38322.1
Two-component system, OmpR family, response regulator ResD.
 
 0.878
SDO17071.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.878
Your Current Organism:
Bacillus daliensis
NCBI taxonomy Id: 745820
Other names: B. daliensis, Bacillus daliensis Zhai et al. 2012, Bacillus sp. DLS13, CGMCC 1.10369, JCM 17097, NBRC 107572, strain DLS13
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