A0A087ZNE5 protein (Apis mellifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A087ZNE5

UBP-type domain-containing protein. (93 aa)

Predicted Functional Partners:

A0A088A320

0.974

A0A088ALH8

0.974

LOC408702

0.973

Nipped-A

0.970

KAT2A

0.970

LOC410004

0.959

A0A088A4J6

0.959

LOC411658

0.958

A0A088AL74

0.953

Taf12

0.951

Your Current Organism:

Apis mellifera

NCBI taxonomy Id: 7460
Other names: A. mellifera, Apis mellifica, European honey bee, Western honey bee, bee, honey bee, honeybee

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A087ZNE5	A0A088A320	A0A087ZNE5	A0A088A320	UBP-type domain-containing protein.	Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	0.974
A0A087ZNE5	A0A088A4J6	A0A087ZNE5	A0A088A4J6	UBP-type domain-containing protein.	Uncharacterized protein.	0.959
A0A087ZNE5	A0A088AL74	A0A087ZNE5	A0A088AL74	UBP-type domain-containing protein.	Transcriptional adapter.	0.953
A0A087ZNE5	A0A088ALH8	A0A087ZNE5	A0A088ALH8	UBP-type domain-containing protein.	SCA7 domain-containing protein.	0.974
A0A087ZNE5	KAT2A	A0A087ZNE5	A0A088ARP8	UBP-type domain-containing protein.	Uncharacterized protein.	0.970
A0A087ZNE5	LOC408702	A0A087ZNE5	A0A088A5K9	UBP-type domain-containing protein.	SGF29 C-terminal domain-containing protein.	0.973
A0A087ZNE5	LOC410004	A0A087ZNE5	A0A087ZSW5	UBP-type domain-containing protein.	Uncharacterized protein.	0.959
A0A087ZNE5	LOC411658	A0A087ZNE5	A0A087ZNW9	UBP-type domain-containing protein.	Uncharacterized protein.	0.958
A0A087ZNE5	Nipped-A	A0A087ZNE5	A0A088AR50	UBP-type domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.970
A0A087ZNE5	Taf12	A0A087ZNE5	A0A088A7E3	UBP-type domain-containing protein.	TFIID_20kDa domain-containing protein.	0.951
A0A088A320	A0A087ZNE5	A0A088A320	A0A087ZNE5	Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	UBP-type domain-containing protein.	0.974
A0A088A320	A0A088A4J6	A0A088A320	A0A088A4J6	Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Uncharacterized protein.	0.986
A0A088A320	A0A088AL74	A0A088A320	A0A088AL74	Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Transcriptional adapter.	0.985
A0A088A320	A0A088ALH8	A0A088A320	A0A088ALH8	Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	SCA7 domain-containing protein.	0.998
A0A088A320	KAT2A	A0A088A320	A0A088ARP8	Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Uncharacterized protein.	0.993
A0A088A320	LOC408702	A0A088A320	A0A088A5K9	Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	SGF29 C-terminal domain-containing protein.	0.995
A0A088A320	LOC410004	A0A088A320	A0A087ZSW5	Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Uncharacterized protein.	0.991
A0A088A320	LOC411658	A0A088A320	A0A087ZNW9	Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Uncharacterized protein.	0.994
A0A088A320	Nipped-A	A0A088A320	A0A088AR50	Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.994
A0A088A320	Taf12	A0A088A320	A0A088A7E3	Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	TFIID_20kDa domain-containing protein.	0.992