Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A087ZW46 | A0A088A1K3 | A0A087ZW46 | A0A088A1K3 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | ERCC4 domain-containing protein. | 0.849 |
A0A087ZW46 | A0A088AHI8 | A0A087ZW46 | A0A088AHI8 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | RECA_2 domain-containing protein. | 0.716 |
A0A087ZW46 | A0A088AVM4 | A0A087ZW46 | A0A088AVM4 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | RECA_2 domain-containing protein. | 0.609 |
A0A087ZW46 | LOC551820 | A0A087ZW46 | A0A088ABI7 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family. | 0.773 |
A0A087ZW46 | LOC726449 | A0A087ZW46 | A0A087ZQA6 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Uncharacterized protein. | 0.610 |
A0A087ZW46 | Rad51 | A0A087ZW46 | A0A088A022 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.791 |
A0A087ZW46 | mei-W68 | A0A087ZW46 | A0A088A1N8 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | TP6A_N domain-containing protein. | 0.789 |
A0A087ZW46 | mus209 | A0A087ZW46 | A0A088AW48 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.858 |
A0A088A1K3 | A0A087ZW46 | A0A088A1K3 | A0A087ZW46 | ERCC4 domain-containing protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.849 |
A0A088A1K3 | A0A088AHI8 | A0A088A1K3 | A0A088AHI8 | ERCC4 domain-containing protein. | RECA_2 domain-containing protein. | 0.901 |
A0A088A1K3 | A0A088AVM4 | A0A088A1K3 | A0A088AVM4 | ERCC4 domain-containing protein. | RECA_2 domain-containing protein. | 0.883 |
A0A088A1K3 | LOC551820 | A0A088A1K3 | A0A088ABI7 | ERCC4 domain-containing protein. | Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family. | 0.674 |
A0A088A1K3 | LOC726449 | A0A088A1K3 | A0A087ZQA6 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.474 |
A0A088A1K3 | Rad51 | A0A088A1K3 | A0A088A022 | ERCC4 domain-containing protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.980 |
A0A088A1K3 | mei-W68 | A0A088A1K3 | A0A088A1N8 | ERCC4 domain-containing protein. | TP6A_N domain-containing protein. | 0.837 |
A0A088A1K3 | mus209 | A0A088A1K3 | A0A088AW48 | ERCC4 domain-containing protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.600 |
A0A088A5P6 | LOC412082 | A0A088A5P6 | A0A087ZYC5 | WW domain-containing protein. | Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family. | 0.539 |
A0A088A5P6 | LOC726449 | A0A088A5P6 | A0A087ZQA6 | WW domain-containing protein. | Uncharacterized protein. | 0.549 |
A0A088AHI8 | A0A087ZW46 | A0A088AHI8 | A0A087ZW46 | RECA_2 domain-containing protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.716 |
A0A088AHI8 | A0A088A1K3 | A0A088AHI8 | A0A088A1K3 | RECA_2 domain-containing protein. | ERCC4 domain-containing protein. | 0.901 |
page 1 of 4