Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A087ZQC6 | Rab23 | A0A087ZQC6 | A0A087ZQN8 | Uncharacterized protein. | Uncharacterized protein. | 0.739 |
A0A087ZUJ9 | A0A088AHY6 | A0A087ZUJ9 | A0A088AHY6 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.988 |
A0A087ZUJ9 | Rab14 | A0A087ZUJ9 | A0A088A3U8 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.769 |
A0A087ZUJ9 | Rab23 | A0A087ZUJ9 | A0A087ZQN8 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.558 |
A0A088A1T6 | Rab23 | A0A088A1T6 | A0A087ZQN8 | Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. | Uncharacterized protein. | 0.477 |
A0A088AHY6 | A0A087ZUJ9 | A0A088AHY6 | A0A087ZUJ9 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.988 |
A0A088AHY6 | Rab14 | A0A088AHY6 | A0A088A3U8 | Uncharacterized protein. | Uncharacterized protein. | 0.624 |
A0A088AHY6 | Rab23 | A0A088AHY6 | A0A087ZQN8 | Uncharacterized protein. | Uncharacterized protein. | 0.567 |
LOC408522 | Rab23 | A0A088AF07 | A0A087ZQN8 | Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. | Uncharacterized protein. | 0.757 |
LOC408522 | zuc | A0A088AF07 | A0A087ZS58 | Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. | Uncharacterized protein. | 0.685 |
LOC411085 | Rab23 | A0A088AB59 | A0A087ZQN8 | Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. | Uncharacterized protein. | 0.465 |
LOC411338 | Rab23 | A0A087ZUZ7 | A0A087ZQN8 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.461 |
Rab14 | A0A087ZUJ9 | A0A088A3U8 | A0A087ZUJ9 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.769 |
Rab14 | A0A088AHY6 | A0A088A3U8 | A0A088AHY6 | Uncharacterized protein. | Uncharacterized protein. | 0.624 |
Rab14 | Rab23 | A0A088A3U8 | A0A087ZQN8 | Uncharacterized protein. | Uncharacterized protein. | 0.465 |
Rab23 | A0A087ZQC6 | A0A087ZQN8 | A0A087ZQC6 | Uncharacterized protein. | Uncharacterized protein. | 0.739 |
Rab23 | A0A087ZUJ9 | A0A087ZQN8 | A0A087ZUJ9 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.558 |
Rab23 | A0A088A1T6 | A0A087ZQN8 | A0A088A1T6 | Uncharacterized protein. | Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. | 0.477 |
Rab23 | A0A088AHY6 | A0A087ZQN8 | A0A088AHY6 | Uncharacterized protein. | Uncharacterized protein. | 0.567 |
Rab23 | LOC408522 | A0A087ZQN8 | A0A088AF07 | Uncharacterized protein. | Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. | 0.757 |
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