STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A088A293Protein kinase domain-containing protein. (408 aa)    
Predicted Functional Partners:
Aats-tyr
Tyrosine--tRNA ligase.
  
 
 0.866
A0A087ZV42
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.850
A0A088A891
Uncharacterized protein.
  
 
 0.842
A0A087ZNQ6
S1 motif domain-containing protein.
   
 0.816
A0A088ASG1
Uncharacterized protein.
  
  
 0.810
Su(var)3-9
Putative H3K9 methyltransferase.
   
 0.633
LOC409457
Uncharacterized protein.
   
 0.623
A0A088AA85
eIF2B_5 domain-containing protein.
   
 0.590
eIF2B-alpha
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 
 0.536
LOC552764
Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner.
   
 
 0.522
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Apis mellifica, European honey bee, Western honey bee, bee, honey bee, honeybee
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