STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A088A7K9tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (379 aa)    
Predicted Functional Partners:
A0A088A891
Uncharacterized protein.
  
0.991
Aats-tyr
Tyrosine--tRNA ligase.
  
 0.975
RpL30
Ribosomal_L7Ae domain-containing protein.
   
 0.962
RpL23A
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.962
RpL29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.959
RpL38
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.952
Aats-lys
Lysine--tRNA ligase.
  
 0.952
RpL31
Uncharacterized protein.
   
 0.950
RpL21
Uncharacterized protein.
   
 0.950
RpL23
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 0.945
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Apis mellifica, European honey bee, Western honey bee, bee, honey bee, honeybee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.