STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A088A9Y5Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (699 aa)    
Predicted Functional Partners:
LOC412170
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.944
A0A088AP08
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
     
 0.938
A0A088A139
Uncharacterized protein.
     
 0.928
LOC409708
Glucosylceramidase.
   
 
 0.925
LOC409709
Glucosylceramidase.
   
 
 0.925
bwa
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
     
 0.916
A0A087ZNN2
Neutral ceramidase.
     
 0.912
A0A088A1U3
DAGKc domain-containing protein.
    
 0.912
A0A088A679
Uncharacterized protein.
     
 0.910
LOC726784
acidPPc domain-containing protein.
     
 0.909
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Apis mellifica, European honey bee, Western honey bee, bee, honey bee, honeybee
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