STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slip1PDZ domain-containing protein. (854 aa)    
Predicted Functional Partners:
LOC725906
PHD-type domain-containing protein.
   
    0.842
A0A088AIT8
BTP domain-containing protein.
   
    0.842
A0A088A066
Uncharacterized protein.
   
 0.821
A0A088A067
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.821
A0A088A8J7
Uncharacterized protein.
    
 0.775
LOC409303
Uncharacterized protein.
    
 0.739
A0A088A2Y4
Uncharacterized protein.
    
 0.739
LOC551431
CS domain-containing protein.
      
 0.668
LOC409459
Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.
      
 0.558
RpL40
Ubiquitin-like domain-containing protein.
    
  0.557
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Apis mellifica, European honey bee, Western honey bee, bee, honey bee, honeybee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.