STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps830S ribosomal protein S8, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit. (134 aa)    
Predicted Functional Partners:
rpl14
50S ribosomal protein L14, chloroplastic; Binds to 23S rRNA.
 
 
 0.996
A0A2P6RRS8
Putative ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
 
 
 0.987
A0A2P6PCY4
Putative ribosomal protein S5/S7; Belongs to the universal ribosomal protein uS7 family.
 
 0.985
rps2
30S ribosomal protein S2, chloroplastic.
 
 0.982
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
  
 0.976
A0A2P6RRS6
Putative ribosomal protein L14P; Belongs to the universal ribosomal protein uL14 family.
 
 
 0.974
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.972
rps11
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 0.971
A0A2P6PC17
Putative ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
 
 
 0.971
A0A2P6RRS0
Putative ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
 
 
 0.966
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.