STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6P270KH_8 domain-containing protein. (201 aa)    
Predicted Functional Partners:
A0A2P6QBN5
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.945
A0A2P6PCI6
Putative sas10 domain-containing protein.
   
 0.935
A0A2P6S3F0
Putative ribosomal RNA-processing protein.
   
 0.930
A0A2P6RD79
Putative suppressor of forked, tetratricopeptide-like helical domain, nucleic acid-binding protein.
   
 0.923
A0A2P6Q0Z7
Putative transcription factor WD40-like family.
   
 0.917
A0A2P6PGP2
Uncharacterized protein.
   
 0.908
A0A2P6PQ27
Putative rRNA-processing protein Fcf1/Utp23.
   
 0.907
A0A2P6S3M6
Putative ribosomal protein S4/S9.
   
 0.893
A0A2P6QDV1
Putative rRNA biogenesis protein RRP36.
   
 0.892
A0A2P6R2D9
Putative nucleolar protein.
   
 0.890
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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