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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6P359Putative transcription factor MADS-MIKC family. (254 aa)    
Predicted Functional Partners:
A0A2P6RMJ5
Putative transcription factor TFIIB.
      
 0.732
A0A2P6R546
Putative phosphatidylethanolamine-binding protein.
   
  
 0.661
A0A2P6P2B4
Putative transcription factor TFIIB.
      
 0.636
A0A2P6RBT1
Putative phosphatidylethanolamine-binding protein.
   
  
 0.633
A0A2P6QY68
Putative transcription factor C3H family.
   
 
 0.631
A0A2P6RCE9
Uncharacterized protein.
   
  
 0.629
A0A2P6S435
Putative ClpA/B family, P-loop containing nucleoside triphosphate hydrolase; Belongs to the ClpA/ClpB family.
   
  
 0.629
A0A2P6P387
Putative transcription factor bHLH family.
      
 0.624
A0A2P6P388
COBRA-like protein; Belongs to the COBRA family.
      
 0.624
A0A2P6PDV4
Tubby-like F-box protein; Belongs to the TUB family.
    
 
 0.614
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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