STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6P3C5Putative G patch domain-containing protein. (988 aa)    
Predicted Functional Partners:
A0A2P6P1F5
Putative mRNA splicing factor, Cwf18.
    
 0.919
A0A2P6Q3H4
Putative mRNA splicing factor, Cwf18.
    
 0.919
A0A2P6PMS9
Putative transcription factor WD40-like family.
    
 
 0.913
A0A2P6RS35
Putative transcription factor WD40-like family.
    
 
 0.913
A0A2P6RS52
Putative transcription factor WD40-like family.
    
 
 0.913
A0A2P6PST3
Putative mRNA splicing factor SYF2.
    
  0.871
A0A2P6PST8
Uncharacterized protein.
    
  0.871
A0A2P6PX89
Putative mRNA splicing factor SYF2.
    
  0.871
A0A2P6RVS2
Putative mRNA splicing factor SYF2.
    
  0.871
A0A2P6S9F0
Putative mRNA splicing factor SYF2.
    
  0.871
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.