STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6P3N2Putative aluminum-activated malate transporter. (601 aa)    
Predicted Functional Partners:
A0A2P6RLV7
Putative non-specific serine/threonine protein kinase; Belongs to the PI3/PI4-kinase family.
   
 
 0.717
A0A2P6QK83
SAGA-associated factor 11.
    
 
 0.689
A0A2P6RYP6
Putative transcription factor Hap3/NF-YB family.
   
 
 0.686
A0A2P6PN75
Uncharacterized protein.
   
 
 0.558
A0A2P6RBP3
Putative transcription factor Hap3/NF-YB family.
    
 
 0.498
A0A2P6RYK5
Putative transcription factor Hap3/NF-YB family.
    
 
 0.498
A0A2P6PQJ4
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 
 0.484
A0A2P6S2T1
Putative transcription initiation factor TFIID, 23-30kDa subunit.
    
 
 0.484
A0A2P6S2U4
Putative transcription initiation factor TFIID, 23-30kDa subunit.
    
 
 0.484
A0A2P6PCN5
Putative rubredoxin-type, RNA polymerase I transcription initiation factor TAF1B/Rrn7.
    
 
 0.451
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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