STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6P4W7Putative Coiled-coil domain-containing protein. (249 aa)    
Predicted Functional Partners:
A0A2P6SJW1
Putative U4/U6 small nuclear ribonucleoprotein Prp3.
    
   0.670
A0A2P6Q4B9
Putative Dim1 family, thioredoxin-like protein.
    
   0.407
A0A2P6QE72
Putative Dim1 family, thioredoxin-like protein.
    
   0.407
A0A2P6QED6
Putative Dim1 family, thioredoxin-like protein.
    
   0.407
A0A2P6R4R6
Putative Dim1 family, thioredoxin-like protein.
    
   0.407
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.