STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PAN6Uncharacterized protein. (407 aa)    
Predicted Functional Partners:
A0A2P6R0Z2
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
    0.536
A0A2P6R4N7
Uncharacterized protein.
      
 0.524
A0A2P6R3Z3
Uncharacterized protein.
      
 0.518
A0A2P6SND6
Putative FMN-binding split barrel.
      
 0.507
A0A2P6PLN0
Uncharacterized protein.
      
 0.487
A0A2P6PCI6
Putative sas10 domain-containing protein.
   
    0.485
A0A2P6RBI7
Putative Brix domain-containing protein.
   
    0.485
A0A2P6R2P3
Putative UVR domain, hemimethylated DNA-binding domain-containing protein.
   
  
 0.477
A0A2P6P8Y9
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
   
  
 0.476
A0A2P6RSE8
Putative photosystem I.
  
    0.476
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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