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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PAS3Putative P-loop containing nucleoside triphosphate hydrolase, leucine-rich repeat domain, L; Belongs to the disease resistance NB-LRR family. (955 aa)    
Predicted Functional Partners:
A0A2P6PU72
Putative RIN4, pathogenic type III effector avirulence factor Avr cleavage.
    
  0.657
A0A2P6RXT9
Putative PWWP domain-containing protein.
  
 
   0.429
A0A2P6PR28
Putative transcription factor C2H2 family.
  
     0.422
A0A2P6P311
Putative transcription factor MYB family.
  
     0.417
A0A2P6PR19
Putative transcription factor C2H2 family.
  
     0.412
A0A2P6PVJ0
Putative Zein-binding domain-containing protein.
  
     0.403
A0A2P6SC07
Putative wall-associated receptor kinase, galacturonan-binding domain-containing protein.
  
 
   0.401
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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