STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PBY4Putative ribosomal protein L7/L12. (226 aa)    
Predicted Functional Partners:
A0A2P6RIW9
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.936
A0A2P6RKB2
Putative ribosomal protein S16.
   
 
 0.932
A0A2P6R841
Putative ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 0.924
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 0.922
A0A2P6Q827
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 0.922
A0A2P6QGP8
Putative ribosomal protein L9.
   
 0.921
A0A2P6RIG6
Putative ribosomal protein S6.
  
 
 0.921
A0A2P6SP83
Putative ribosomal protein L9.
   
 0.921
A0A2P6P7Y3
Putative aminoacyl-tRNA hydrolase.
  
 0.917
A0A2P6RNB5
Putative ribosomal protein L25.
  
 
 0.911
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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