STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PCX4Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (591 aa)    
Predicted Functional Partners:
A0A2P6P0Z9
Putative NADH:ubiquinone reductase (H(+)-translocating).
      
 0.487
A0A2P6PP17
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
  
 0.467
A0A2P6PDR5
Putative pentatricopeptide.
      
 0.459
A0A2P6S0K3
Putative regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II.
      
 0.453
A0A2P6P9K0
Putative RNA-directed DNA polymerase.
      
 0.443
A0A2P6P346
Putative transcription regulator mTERF family.
    
 
 0.439
A0A2P6Q5J9
Putative RNA-directed DNA polymerase.
      
 0.420
A0A2P6P115
Putative NADH:ubiquinone reductase (H(+)-translocating).
      
 0.410
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.