STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PEK0Putative transcription factor B3-Domain family. (454 aa)    
Predicted Functional Partners:
A0A2P6SJZ6
DUF4378 domain-containing protein.
  
     0.520
A0A2P6R605
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 
 0.488
A0A2P6PHU3
Putative plant lipid transfer protein/Par allergen; Belongs to the plant LTP family.
  
     0.485
A0A2P6PYK6
Uncharacterized protein.
  
     0.479
A0A2P6RQ03
Putative F-box domain-containing protein.
  
     0.479
A0A2P6PMM5
Uncharacterized protein.
  
     0.474
A0A2P6QJ12
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.467
A0A2P6RK47
Putative F-box domain-containing protein.
  
     0.466
A0A2P6R7C8
Putative F-box domain, leucine-rich repeat domain, L domain-containing protein.
  
     0.465
A0A2P6QJP0
Uncharacterized protein.
  
     0.464
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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