STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PJE8Putative lyase. (559 aa)    
Predicted Functional Partners:
A0A2P6Q344
Putative (3S,6E)-nerolidol synthase.
  
 
 
0.687
A0A2P6Q377
Linalool nerolidol synthase 2.
  
 
 
0.687
A0A2P6Q364
(3S,6E)-nerolidol synthase 1.
  
 
 
0.684
A0A2P6Q231
Putative transferase; Belongs to the FPP/GGPP synthase family.
   
 
 0.679
A0A2P6PPV8
Putative squalene synthase.
     
 0.658
A0A2P6QLH7
Putative (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
   
 
 0.657
A0A2P6Q325
Putative alpha-farnesene synthase.
     
 
0.650
A0A2P6Q354
Putative lyase.
     
 
0.650
A0A2P6SBH4
Putative lyase.
     
 
0.650
A0A2P6PSZ5
Putative geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
   
 
 0.622
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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