STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PKT7Putative endopeptidase, NLPC/P60 domain, LRAT-like domain-containing protein. (234 aa)    
Predicted Functional Partners:
A0A2P6R5T3
Putative ankyrin repeat-containing domain, acetyltransferase A, auxiliary subunit.
  
 0.635
A0A2P6P1R8
Putative thioredoxin-like, acetyltransferase A, auxiliary subunit.
   
 0.596
A0A2P6RCQ8
Putative co-chaperone Hsc20.
  
 0.591
A0A2P6RCR3
Putative co-chaperone Hsc20.
  
 0.591
A0A2P6P5T9
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 
 0.575
A0A2P6QA77
Putative 43kDa postsynaptic protein.
  
 0.569
A0A2P6R591
Putative tetratricopeptide-like helical domain-containing protein.
  
 0.569
A0A2P6S0S8
Putative Heat shock protein 70 family.
   
 0.547
A0A2P6PZ78
Putative Heat shock protein Hsp90 family.
   
 0.509
A0A2P6QCM0
Putative Heat shock protein Hsp90 family.
   
 0.509
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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