STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PL00Putative transcription factor/ chromatin remodeling BED-type(Zn) family. (896 aa)    
Predicted Functional Partners:
A0A2P6QZF2
Putative ribonuclease H-like domain-containing protein.
  
     0.463
A0A2P6QZD1
Putative HAT dimerization domain, ribonuclease H-like domain, hAT-like transposase, RNase-H.
  
     0.458
A0A2P6QVB4
Putative HAT dimerization domain, ribonuclease H-like domain-containing protein.
  
     0.441
A0A2P6SBA5
Putative HAT dimerization domain, ribonuclease H-like domain, hAT-like transposase, RNase-H.
  
     0.422
A0A2P6RDB2
Putative HAT dimerization domain, ribonuclease H-like domain-containing protein.
  
     0.410
A0A2P6PNL8
Putative HAT dimerization domain, ribonuclease H-like domain-containing protein.
  
     0.409
A0A2P6PUW1
Putative HAT dimerization domain, ribonuclease H-like domain-containing protein.
  
     0.400
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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