Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A2P6PMF7Protein kinase domain-containing protein. (673 aa)    
Predicted Functional Partners:
A0A2P6RDG4
PPM-type phosphatase domain-containing protein.
    
 0.492
A0A2P6QKH1
Putative Zinc finger, HIT-type.
      
 0.482
A0A2P6PBT8
Putative nucleotide-binding alpha-beta plait domain-containing protein.
      
 0.464
A0A2P6RL76
Putative nucleotide-binding alpha-beta plait domain-containing protein.
      
 0.464
A0A2P6Q1F8
Putative peptidylprolyl isomerase.
    
 0.410
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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