STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PQI6Putative transcription regulator Others family. (722 aa)    
Predicted Functional Partners:
A0A2P6P5L7
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.697
A0A2P6PCA0
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.697
A0A2P6PTK9
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.697
A0A2P6REU7
Putative histone deacetylase.
   
 0.697
A0A2P6SJB8
Putative [histone H3]-lysine-36 demethylase.
   
 0.697
A0A2P6PLL0
Putative transcription factor Homobox-WOX family.
   
 
 0.680
A0A2P6QSL6
Putative transcription factor Homobox-WOX family.
   
 
 0.680
A0A2P6PXV6
Putative Phox domain-containing protein.
    
 0.579
A0A2P6RVZ6
Putative Phox domain-containing protein.
    
 0.579
A0A2P6SJJ1
Putative transcription factor MYB/SANT family.
    
 0.579
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.