STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PQT160S ribosomal protein L4. (407 aa)    
Predicted Functional Partners:
A0A2P6PWU6
Putative ribosomal protein L18e.
  
 0.997
A0A2P6QYW6
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.997
A0A2P6PWX4
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.994
A0A2P6QRD2
Putative ribosomal protein L10P.
  
 0.994
A0A2P6QYM8
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.994
A0A2P6SL27
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.994
A0A2P6PU03
Putative ribosomal protein L32e.
  
 0.993
A0A2P6PWS7
Putative ribosomal protein L22e.
   
 0.993
A0A2P6Q5C4
Putative ribosomal protein L32e.
  
 0.993
A0A2P6Q6R4
Putative ribosomal protein L2.
 
 0.993
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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