STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PQT9Putative transcription factor C3H family. (474 aa)    
Predicted Functional Partners:
A0A2P6RZS6
Putative Zinc finger, RING/FYVE/PHD-type.
    
 0.715
A0A2P6S6V2
Putative Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-H2-type.
    
 0.715
A0A2P6S8U5
Putative transcription factor C2H2 family.
    
 0.715
A0A2P6SGE9
Putative transcription factor C2H2 family.
    
 0.715
A0A2P6SGK4
Putative transcription factor C2H2 family.
    
 0.715
A0A2P6S3X3
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
  
  
  0.581
A0A2P6QLL3
Putative Coiled-coil domain-containing protein.
    
  0.571
A0A2P6RJC6
Putative transcription factor WD40-like family.
  
 
  0.563
A0A2P6QIJ3
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.562
A0A2P6SKA4
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.562
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.