STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PVW4Putative rmlC-like jelly roll protein. (511 aa)    
Predicted Functional Partners:
A0A2P6PGT9
Putative oberon, PHD finger domain-containing protein.
  
     0.524
A0A2P6P5X3
Uncharacterized protein.
  
     0.497
A0A2P6P3R8
Uncharacterized protein.
      
 0.471
A0A2P6QYR4
Putative START-like domain, Bet v I type allergen.
  
     0.469
A0A2P6R3B4
Putative START-like domain-containing protein.
      
 0.465
A0A2P6QYN5
Putative START-like domain, Bet v I type allergen; Belongs to the BetVI family.
  
   
 0.455
A0A2P6SJR3
Putative glutathione transferase.
  
     0.455
A0A2P6QYQ7
Putative START-like domain, Bet v I type allergen; Belongs to the BetVI family.
  
   
 0.453
A0A2P6Q371
Putative transcription factor bHLH family.
  
     0.451
A0A2P6Q3X2
Putative alpha/Beta hydrolase.
  
     0.449
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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