STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PYL9Methyltransferase. (719 aa)    
Predicted Functional Partners:
A0A2P6Q2T6
Putative transferase.
   
 
 0.825
A0A2P6RM54
Putative transcription factor WD40-like family.
   
 
 0.659
A0A2P6QA36
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
  0.639
A0A2P6SLN1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
  0.639
A0A2P6P5F0
Protein-L-isoaspartate O-methyltransferase.
   
  
 0.610
A0A2P6R646
Putative tRNA pseudouridine(13) synthase.
   
  
 0.560
A0A2P6SFE3
Leucine carboxyl methyltransferase 1 homolog; Involved in brassinosteroid (BR) signaling.
   
  
 0.557
A0A2P6PQU8
Putative transcription factor WD40-like family.
   
    0.556
A0A2P6QRJ6
Putative glucuronosyltransferase.
  
     0.531
A0A2P6Q7C0
Putative APO domain-containing protein.
  
     0.528
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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