STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6PYU1Putative nucleoside-triphosphate phosphatase. (549 aa)    
Predicted Functional Partners:
A0A2P6RIW9
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.872
A0A2P6QGP8
Putative ribosomal protein L9.
   
 
 0.828
A0A2P6SP83
Putative ribosomal protein L9.
   
 
 0.828
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
    
   0.799
A0A2P6PCB2
Putative ribosomal protein L33.
    
   0.799
A0A2P6Q827
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
    
   0.799
A0A2P6QY03
Putative ribosomal protein L33.
    
   0.799
A0A2P6PD66
Putative ribosomal protein L27.
   
 
 0.745
A0A2P6PP51
Putative ribosomal protein L27.
   
 
 0.745
A0A2P6S6G9
Putative ribosomal protein L27.
   
 
 0.745
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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