STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6Q233Putative ribosomal protein S6e. (87 aa)    
Predicted Functional Partners:
A0A2P6RLH6
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.977
A0A2P6S3M6
Putative ribosomal protein S4/S9.
   
 0.974
A0A2P6PWU6
Putative ribosomal protein L18e.
   
 
 0.972
A0A2P6QHU3
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.970
A0A2P6QQ80
Putative ribosomal protein S19/S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.970
A0A2P6R5U1
Putative ribosomal protein S19/S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.970
A0A2P6SDZ0
Putative ribosomal protein S12/S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.970
A0A2P6P3S1
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.969
A0A2P6P6N3
Putative plectin/S10.
   
 0.969
A0A2P6PPC8
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.969
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.