STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6Q5S9Putative all-trans-nonaprenyl-diphosphate synthase (Geranyl-diphosphate specific). (108 aa)    
Predicted Functional Partners:
A0A2P6SBS5
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.
  
 0.804
A0A2P6RFV0
Putative 15-cis-phytoene synthase.
  
 0.682
A0A2P6S0E0
Putative 15-cis-phytoene synthase.
  
 0.682
A0A2P6R520
Putative isopentenyl-diphosphate Delta-isomerase.
  
 
 0.674
A0A2P6PPV8
Putative squalene synthase.
  
 0.647
A0A2P6P1E8
Putative abieta-7,13-dien-18-ol hydroxylase; Belongs to the cytochrome P450 family.
      
 0.611
A0A2P6QNE6
Putative 15-cis-phytoene synthase.
  
 0.607
A0A2P6P7F4
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.603
A0A2P6Q231
Putative transferase; Belongs to the FPP/GGPP synthase family.
    
 0.600
A0A2P6RY40
Putative 1,4-dihydroxy-2-naphthoate polyprenyltransferase.
    
 0.595
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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