STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P6QC85Uncharacterized protein. (227 aa)    
Predicted Functional Partners:
A0A2P6RD79
Putative suppressor of forked, tetratricopeptide-like helical domain, nucleic acid-binding protein.
   
 
 0.879
A0A2P6RGG9
Putative RNA helicase.
   
 
 0.832
A0A2P6RWF6
Putative transcription factor WD40-like family.
   
  
 0.750
A0A2P6PPL4
Putative nucleotide-binding alpha-beta plait domain-containing protein.
   
 
 0.743
A0A2P6RRL1
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.743
A0A2P6RZ10
Putative CCAAT-binding factor.
   
 
 0.734
A0A2P6PRP7
Putative ribosomal protein S1.
   
 
 0.722
A0A2P6QVK9
Putative ribosomal protein S1.
   
 
 0.722
A0A2P6QZH7
Putative polyribonucleotide nucleotidyltransferase.
   
 
 0.722
A0A2P6Q0Z7
Putative transcription factor WD40-like family.
   
    0.702
Your Current Organism:
Rosa chinensis
NCBI taxonomy Id: 74649
Other names: China rose, R. chinensis, Rosa chinensis Jacq., Rosa indica auct., non L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.